BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B06LP1|AL424909
(1060 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1171 1465 0.0
>3x_Contig1171
Length = 5011
Score = 1465 bits (728), Expect = 0.0
Identities = 771/796 (96%), Gaps = 1/796 (0%)
Strand = Plus / Minus
Query: 1 acaaggtgatcaatgcagataaacccwtgataataaactgcacgtaatttttaaatggca 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 799 acaaggtgatcaatgcagataaacccatgataataaactgcacgtaatttttaaatggca 740
Query: 61 atttaggtatgattgcatatactgtgattccaaacaacaaaattgtgaaaatggtaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atttaggtatgattgcatatactgtgattccaaacaacaaaattgtgaaaatggtaacaa 680
Query: 121 ccatcaataaataaggatgcaccagttcgtcagaattttggtgagckaactccaatatat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 679 ccatcaataaataaggatgcaccagttcgtcagaattttggtgagctaactccaatatat 620
Query: 181 ttrarttactggactctgattcttctgtggagtkggaattcttgaaactgaaaatcttaa 240
|| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 619 ttaaattactggactctgattcttctgtggagttggaattcttgaaactgaaaatcttaa 560
Query: 241 tcgtcaaatcgtcaaatatgtccatgtcatctaccttcttcctgttgaracaaaccttag 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 559 tcgtcaaatcgtcaaatatgtccatgtcatctaccttcttcctgttgaaacaaaccttag 500
Query: 301 acgatttgctcgaggggtttctgtcataattcgatgggatgtkattgatacatatcccca 360
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 499 acgatttgctcgaggagtttctgtcataattcgatgggatgttattgatacatatcccca 440
Query: 361 tataccctgaraatatttgarcgttttctaatccatcagtatattcctgtgaactgaact 420
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tataccctgaaaatatttgaacgttttctaatccatcagtatattcctgtgaactgaact 380
Query: 421 gatttgaratgactggrtataggggggatttatcgttgaattgatatttcaccaaatacg 480
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 379 gatttgaaatgactggatataggggagatttatcgttgaattgatatttcaccaaatacg 320
Query: 481 ttgaactctgatcgacgttgtaacaacccactaataarrrtaccaataarratactgaga 540
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct: 319 ttgaactctgatcgacgttgtaacaacccactaataaaaataccaataaaaatactgaaa 260
Query: 541 taaaagaagtgattaacaccagcgccctaggaatacgttttcctagcttatagaataagg 600
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 259 taaaagaagtaattaacaccagcaccctaggaatacgttttcctagcttatagaataagg 200
Query: 601 tgaatggkagagacataatgattttgctatttatcagtgtkttgttgaaggatgctaagt 660
||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 199 tgaatggtagaaacataatgattttg-tatttatcagtgttttgttgaaggatgctaagt 141
Query: 661 tacacctaactgtactagaaagtaaattgaaactaaaagctcattgaaagtttgcaatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tacacctaactgtactagaaagtaaattgaaactaaaagctcattgaaagtttgcaatat 81
Query: 721 gaatgcatctggttatatacgtttaatgaactgaaataatactgcatcatatctgataat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gaatgcatctggttatatacgtttaatgaactgaaataatactgcatcatatctgataat 21
Query: 781 cttgttccagtattca 796
||||||||||||||||
Sbjct: 20 cttgttccagtattca 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7241
Number of Sequences: 1807
Number of extensions: 7241
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 1060
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1044
effective length of database: 10,329,639
effective search space: 10784143116
effective search space used: 10784143116
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)